Insertion junction: CLIP2.051013_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.051013
Chromosome:chromosome 13
Location:2341675
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g579017 (1 of 1) PTHR14499//PTHR14499:SF63 - POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTATCAATACCGGTCAGCATTCAGCAAGCGCGACTCCGCCCTCTTGCCA
Internal bar code:ATTCATAATGGCGCTCTTGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2797
LEAP-Seq percent confirming:97.8723
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAATGAGGGTGCTCTGAG
Suggested primer 2:GTGGCTCCAAACCCTAGACC