Insertion junction: CLIP2.051020_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.051020
Chromosome:chromosome 13
Location:1637389
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g573550 ANK26 Predicted protein with ankyrin repeats; (1 of 7) PF12796//PF13637 - Ankyrin repeats (3 copies) (Ank_2) // Ankyrin repeats (many copies) (Ank_4) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCTCCGCCTTCACGCCGCCTGGCAGCACAGGCGCGGAGGCGGGGGAAG
Internal bar code:TGGGGAAAGGGAGTTTGCATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1584
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGATCCTCTTTAGCCCCA
Suggested primer 2:GAGAGGGACGGGAAGGTAGT