Insertion junction: CLIP2.051037_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.051037
Chromosome:chromosome 7
Location:1080542
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g320150 ERJ1 DnaJ-like protein, ER-targeted; (1 of 1) K09517 - DnaJ homolog subfamily B member 11 (DNAJB11) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTAATCCGACGCCTAGGGTTTGCGCACGCATGCACGCACGCACAACCG
Internal bar code:ACAAGAGGGTCAATTTGTTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2939
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:TAAGGTCTGCGGCTCTTTGG
Suggested primer 2:CGAAAGCACTCAGTCCACCT