Insertion junction: CLIP2.051042_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.051042
Chromosome:chromosome 12
Location:7775832
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g554150 (1 of 18) PF12906 - RING-variant domain (RINGv) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCCACGCGCTTCTCCTCGCTCTTTTGCATGTGGGTTGGTATTAGCTTG
Internal bar code:TTACTTTGTTAGAAGTGGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:88
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCCATGCATCCTCTACCG
Suggested primer 2:CATCTCCGTGTCTCCTGGTG