Insertion junction: CLIP2.051043_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.051043
Chromosome:chromosome 2
Location:5727308
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g116550 DNJ24 (1 of 1) PF00226//PF08240 - DnaJ domain (DnaJ) // Alcohol dehydrogenase GroES-like domain (ADH_N); DnaJ-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGAATGGTTTCGGGATGGGGCTTGCTTGGTTGAGAGGGCTAGCTGCAT
Internal bar code:ACCGTGGATGTAGCAGGAATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3680
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TACATCTCATGTCGCGTCGG
Suggested primer 2:ATGTGAACAGCAGGAGTGGG