Insertion junction: CLIP2.051043_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.051043
Chromosome:chromosome 2
Location:5727313
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g116550 DNJ24 (1 of 1) PF00226//PF08240 - DnaJ domain (DnaJ) // Alcohol dehydrogenase GroES-like domain (ADH_N); DnaJ-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGACTCGGCGGCCCACCCCCTGCAGCGGCGTGTGTACGACAGCACGGGA
Internal bar code:ACCGTGGATGTAGCAGGAATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1410
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTGAACAGCAGGAGTGGG
Suggested primer 2:TACATCTCATGTCGCGTCGG