Insertion junction: CLIP2.051053_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.051053
Chromosome:chromosome 4
Location:1939154
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g218600 (1 of 13) IPR008942 - ENTH/VHS intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACACACATGCAGGTGTACCATTCCATGCGGATAGTGGTGCCGCCCATGC
Internal bar code:AATTCGATGGACTAGTCTACCC

Confirmation - LEAP-Seq

LEAP-Seq distance:464
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTGGCCCTAGATTCGAG
Suggested primer 2:GCAACACTTCACAAGCCTGG