Insertion junction: CLIP2.051053_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.051053
Chromosome:chromosome 4
Location:1939163
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g218600 (1 of 13) IPR008942 - ENTH/VHS intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGAAAACATTACGCGTAGGACAGTGTATGCGATGCATGTGTGTGTGTG
Internal bar code:AATTCGATGGACTAGTCTACCC

Confirmation - LEAP-Seq

LEAP-Seq distance:295
LEAP-Seq percent confirming:68.75
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCAACACTTCACAAGCCTGG
Suggested primer 2:CTGCTGGCCCTAGATTCGAG