Insertion junction: CLIP2.051058_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.051058
Chromosome:chromosome 6
Location:1020123
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g256900 SND1C SAND domain-encoding short ORF; (1 of 68) 2.1.1.43 - Histone-lysine N-methyltransferase / Protein-lysine N-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCCCCGATGCCGTTCTACTTGTAGCTGCACTTAATGCGGGTACGCACC
Internal bar code:GTGCGCTCTTGCTAGTTTCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:835
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGTAGCAGACGCATACCG
Suggested primer 2:CCAATCCAACTCCCTTGCCT