Insertion junction: CLIP2.051075_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.051075
Chromosome:chromosome 6
Location:5144197
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g283200 (1 of 1) PTHR13271//PTHR13271:SF14 - UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCAGCTGTGCGCCACGGCGGCTAGCCACCTCTTAACACTGCTGCCCG
Internal bar code:GATATCATTTGACGACGACGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:162
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCTGAACTGGTTGTACGC
Suggested primer 2:GTGATGAAGCCGCATTCGTC