Insertion junction: CLIP2.051081_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.051081
Chromosome:chromosome 10
Location:6044639
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g461750 DMC5 Putative DNA methylase; (1 of 1) PF00145//PF12047 - C-5 cytosine-specific DNA methylase (DNA_methylase) // Cytosine specific DNA methyltransferase replication foci domain (DNMT1-RFD) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGTAACCCGCGTCCTGTACGGTGCGGCGGTCTGCGGCGACCTGTGCCT
Internal bar code:AGGGTCTCCCGCACGCGCGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1004
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGTGCGGTAAGTGAGGAC
Suggested primer 2:GCATCTGCATCACGAGCAAG