Insertion junction: CLIP2.051089_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.051089
Chromosome:chromosome 15
Location:1698177
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre19.g750947 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCATTCATCCCGCAATCCACACAGCCACCCGTTCATTCCGCCATTGCCT
Internal bar code:AATCTATAAGAAACAATGCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1281
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGGTTGAAGAACAGCTGC
Suggested primer 2:AGGATGCCGGTTGTGGTTAG