Insertion junction: CLIP2.051100_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.051100
Chromosome:chromosome 10
Location:1317754
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g427350 CYP31,CYP39A2 Cytochrome P450, CYP213 superfamily; (1 of 1) 1.14.13.79 - Ent-kaurenoic acid oxidase intron
lncRNA_TCONS_00060962 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGACGACAGCAAACGTGGGTGCAGGCAATGGCAGCATCATATCAGTTGGC
Internal bar code:CATGTTAACGTAGCATGGGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3798
LEAP-Seq percent confirming:98.913
LEAP-Seq n confirming:91
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGATCAATGGACGGCAC
Suggested primer 2:CACCAACACCCAGATCCCTC