Insertion junction: CLIP2.051104_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.051104
Chromosome:chromosome 9
Location:5684571
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g410300 (1 of 1) PF00069//PF01593//PF07714//PF08766//PF13450 - Protein kinase domain (Pkinase) // Flavin containing amine oxidoreductase (Amino_oxidase) // Protein tyrosine kinase (Pkinase_Tyr) // DEK C terminal domain (DEK_C) // NAD(P)-binding Rossmann-like domain (NAD_binding_8) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCTGTTAGGAAAACGACGTCGGGGTTCAGTTCAGTGCTGGGCTTGAAA
Internal bar code:GGGCCTTCAATTGAGCAAGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1697
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGCCTACCGAGTACCGAA
Suggested primer 2:GGCGCTTTACTGATGCATGG