Insertion junction: CLIP2.051109_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.051109
Chromosome:chromosome 12
Location:9115992
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g544000 RSP5 (1 of 4) 1.1.1.65 - Pyridoxine 4-dehydrogenase / Pyridoxine dehydrogenase; Radial Spoke Protein 5 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATTACCGGTATGCATTAGGAACGGTCCACAAGTTCTTTGTTGATGCGT
Internal bar code:ACGGGTGGAGCATTTAGGCCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2058
LEAP-Seq percent confirming:53.8462
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TTAGGAGACCGGAGTCCCTG
Suggested primer 2:GGAAAAGAGTAGGCGGGCAT