Insertion junction: CLIP2.051116_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.051116
Chromosome:chromosome 6
Location:3599914
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278131 (1 of 1) IPR000104//IPR002083//IPR008974 - Antifreeze protein, type I // MATH/TRAF domain // TRAF-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGTTGGCCACCCAGGCGGGGATGCTGCCGTCAGCCTCCTCGTCGTCGTC
Internal bar code:CGAGCTTTAAACTGGTTCATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2864
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:AGCACATCCATAACCGGCAA
Suggested primer 2:ATCTATCACTGACGCCGTGC