Insertion junction: CLIP2.051118_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.051118
Chromosome:chromosome 4
Location:3723267
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g229250 (1 of 1) PTHR10209//PTHR10209:SF100 - OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCCATTCCCCTCCACGCTGCCTGCTCCCACTGTGCCGAGGAGCGAAAG
Internal bar code:ACAAAGTAGACGTTCCAGACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1172
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTTCAGGGCGAAGGTTTT
Suggested primer 2:GTGCTACTGCCTGATGAGGG