Insertion junction: CLIP2.051131_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.051131
Chromosome:chromosome 3
Location:5750840
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g187400 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCAAGAAGCCCGAAACAGTCATTCGCTCACTCGCACTCGCACTTTACC
Internal bar code:TGTTGGTCATAGAGACACCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1091
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GACAAAGTTGACCAGCAGCG
Suggested primer 2:CTTGTCGCTGCGGTATTTCG