Insertion junction: CLIP2.051135_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.051135
Chromosome:chromosome 12
Location:4185177
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g517800 (1 of 18) PF12906 - RING-variant domain (RINGv) gene_edge/mRNA_edge/CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTATGGAGCCACAGACTTCGAGCGACGATCCTCTCATAAGCCCCTGCC
Internal bar code:GTGTGCACACGCTTCGATAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:101
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTGTGTGTGTGTGCTCT
Suggested primer 2:CTGATAGCTTGAACACGCGC