Insertion junction: CLIP2.051145_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.051145
Chromosome:chromosome 12
Location:6148972
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g535400 (1 of 1) IPR000104//IPR003590//IPR006553 - Antifreeze protein, type I // Leucine-rich repeat, ribonuclease inhibitor subtype // Leucine-rich repeat, cysteine-containing subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGACGCGCGCGCTTACGTCTGCAGCTTGCCCTCCGCAGCACCCCCACCT
Internal bar code:AACGTTCGACTTTATCGTAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:341
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTTGTCTCATTGCTCCCT
Suggested primer 2:GTAAAGGCCCATGGGGTGAA