Insertion junction: CLIP2.051147_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.051147
Chromosome:chromosome 2
Location:2356513
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g090850 CLPB3 (1 of 1) PTHR11638//PTHR11638:SF121 - ATP-DEPENDENT CLP PROTEASE // CHAPERONE PROTEIN CLPB3, CHLOROPLASTIC; ClpB chaperone, Hsp100 family intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTAGGCTCAACCAAATCGGAAGGCGGAGCACACGAGATCACACCACTT
Internal bar code:TCAAGGTATTCTTTTATCAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:90
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GAGATCGCCAAGGAGTACGG
Suggested primer 2:AATCTCCCCCTCCTTCTCCC