Insertion junction: CLIP2.051148_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.051148
Chromosome:chromosome 8
Location:800831
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g360850 (1 of 1) K18798 - protein AFG1 (AFG1, LACE1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTTACGCCCGTGGGAGCAGGGCCAGGTTTGCGGGGTTTTTATGCCTGA
Internal bar code:ACATTCGATTAATTCATAGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1231
LEAP-Seq percent confirming:41.0714
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGACTACGGTTTCCACGG
Suggested primer 2:CGAGCCTTAAATGTGTCGCG