Insertion junction: CLIP2.051148_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.051148
Chromosome:chromosome 8
Location:800869
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g360850 (1 of 1) K18798 - protein AFG1 (AFG1, LACE1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCGCAAACCTGGCCCTGCTCCCACGGGCGTAAAACAACAAGGGGTGT
Internal bar code:TGTGATATTAAGCCAAGCACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:935
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGCCTTAAATGTGTCGCG
Suggested primer 2:TGTGACTACGGTTTCCACGG