Insertion junction: CLIP2.051152_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.051152
Chromosome:chromosome 9
Location:4459424
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400701 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCCTCCCAAACCCGCTCACACGGCCGGCCTCGTGTCAAGTATGTGTGT
Internal bar code:GGAAGTAGGCCTGAGACAGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2826
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTATTCCTCGACCCAGGA
Suggested primer 2:CAGTGACCAATGGAGGGGAC