Insertion junction: CLIP2.051157_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.051157
Chromosome:chromosome 4
Location:3918351
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g230830 (1 of 1) IPR000104//IPR001012//IPR029071 - Antifreeze protein, type I // UBX domain // Ubiquitin-related domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTAAGGAGGTGGTAGACGGCAGGGGGGGCGCGGCGTGTGGGGTGTTGGG
Internal bar code:TCTACCAACTGCAGAACAGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:111
LEAP-Seq percent confirming:7.14286
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGTGTGTGTGTGTGTGTG
Suggested primer 2:GCAAGGGGTTTCGTTCACAC