Insertion junction: CLIP2.051162_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.051162
Chromosome:chromosome 7
Location:4579241
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g344150 (1 of 1) PTHR21314//PTHR21314:SF0 - UNCHARACTERIZED // UPF0553 PROTEIN C9ORF64 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCAACACACAGGAAGCAAGCTTTGCAGTCCAGCACACTTGCGCATGTT
Internal bar code:GTTATCGTTTTGAATTGTGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1898
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGTGTGTGCACATAGCCA
Suggested primer 2:GAGTGCTACTGTGGGTGCAT