Insertion junction: CLIP2.051173_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.051173
Chromosome:chromosome 6
Location:7350365
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g299850 HLM10 (1 of 2) K11426 - SET and MYND domain-containing protein (SMYD); Histone-lysine N-methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGACGACGAGGGGAGCGATGGCGGGGATGATGATGATGATGGTGATGAT
Internal bar code:GTTCCTTCATATGCGGGTGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1792
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCTTTCCGTGTGTACCGG
Suggested primer 2:GGATGAGGGCGAGGATGAAG