Insertion junction: CLIP2.051180_5

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.051180
Chromosome:chromosome 9
Location:4752856
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGGGAAAGCGAGTGGTTGCAGGTGCGTGCCTGCGCTTGCAGTTCTCA
Internal bar code:GGTACCTTGAACCTGGCAGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1252
LEAP-Seq percent confirming:87.0968
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCGTCTCAGCTTACCCGA
Suggested primer 2:TTGCTTCCTGACTCCAGCAG