Insertion junction: CLIP2.051185_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.051185
Chromosome:chromosome 3
Location:4991655
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g179550 TF2H2 (1 of 1) K03142 - transcription initiation factor TFIIH subunit 2 (TFIIH2, GTF2H2, SSL1); Transcription factor TFIIH, 44 kDa subunit intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTAACCACCGCACTCCGCGACCCGCCCGCCCCGCACGCAGGCGCACCC
Internal bar code:ATAGCACAGTGGGAGTATCCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1787
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAACGAAGCTCTGGGTGC
Suggested primer 2:AGGGCATGATCCGCTATGTG