Insertion junction: CLIP2.051202_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.051202
Chromosome:chromosome 7
Location:2214975
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g327250 (1 of 3) IPR000104//IPR005135 - Antifreeze protein, type I // Endonuclease/exonuclease/phosphatase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTGCCAATTAACATTGTCACCTACAACATCCGCAGCCTGAAGGAGGCA
Internal bar code:ACAGTAGCGTACTGGACATCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:847
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGCTGCCATAGTGTGCAT
Suggested primer 2:GAGGGCTTGCTGTACACCAT