Insertion junction: CLIP2.051205_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.051205
Chromosome:chromosome 5
Location:2057326
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g236650 CYG63 (1 of 5) IPR001054//IPR006189//IPR029787 - Adenylyl cyclase class-3/4/guanylyl cyclase // CHASE domain // Nucleotide cyclase; Adenylate/guanylate cyclase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACACACACACACGCTTCATGGCTGCTGCAGGCGGCACGGTGGCCACGG
Internal bar code:TAACCAGTTAGTGGCGAGCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:516
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTTTCCTCCTTACAGCG
Suggested primer 2:AAAGCATCTACCAACCCCGG