Insertion junction: CLIP2.051224_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.051224
Chromosome:chromosome 1
Location:5031478
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g034900 CDPK5 (1 of 4) PTHR24347:SF138 - PROTEIN F32D8.1; Calcium/calmodulin-dependent protein kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTGGGCTGCTGTCACAGGGCGTGTAGGCTACCGCGTCATGCTTTCGGG
Internal bar code:TGATCTTCGACGCAGGTCAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3130
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:TATCCCGTCACAGCCCCTTA
Suggested primer 2:TCAAGTGATGTGGCGGAGAC