Insertion junction: CLIP2.051224_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.051224
Chromosome:chromosome 9
Location:3614207
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00135978

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGCAGAGATGGGTGCGGCGACCGCTTCAAGAACTCAAGAACTCGACGC
Internal bar code:AAGTATGTGAGGAGAAGTACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3358
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:CTACTGAAGTGCCTGTGCCA
Suggested primer 2:GTCTAGAATCCGGGCTCACG