Insertion junction: CLIP2.051224_5

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.051224
Chromosome:chromosome 11
Location:543367
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467599 (1 of 18) PTHR10774 - EXTENDED SYNAPTOTAGMIN-RELATED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCTTTTGGATTTGTTGGCGCACTTGTTATGGTTGCAAGCTAAGAGGAA
Internal bar code:TGGGTTGTTCTGGCCACGAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:880
LEAP-Seq percent confirming:85.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CGGATGATGCAGTAGGGGTC
Suggested primer 2:CGGATGATGCAGTAGGGGTC