Insertion junction: CLIP2.051246_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.051246
Chromosome:chromosome 1
Location:3721887
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800070 (1 of 1) PF08482 - ATP-dependent helicase C-terminal (HrpB_C) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCCGGCTGTGTGCGTGAGGTGCCCGACGAACAGCTGCGGGATTGCGGC
Internal bar code:CACGGCTTTGGTATTCGTAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2876
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:96
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCTTGGTCATCCGGGTC
Suggested primer 2:TCCTTTTCACGGAGTTCGGG