Insertion junction: CLIP2.051246_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.051246
Chromosome:chromosome 6
Location:2328095
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g267600 LCYE,LEC1,LCYE1 (1 of 1) 5.5.1.18 - Lycopene epsilon-cyclase; lycopene epsilon cyclase, chloroplast precursor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACAGGTGGCTCTGCACGCGGCCCACCCTGCGGATGGACCGGCCAGGAA
Internal bar code:TTGGGACACTCTCGCTCACTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1149
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GCGAGTTGACCAAGACCAGA
Suggested primer 2:ATTTGGTTGTGTTGTCGGCG