Insertion junction: CLIP2.051251_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.051251
Chromosome:chromosome 1
Location:377191
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800004 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCATGTGGCGTCCCGTAGTCAGCGCCCCCTGCAGCGGATCTTGACTGCT
Internal bar code:ATAGTCGGGGCGGTTTTATTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1289
LEAP-Seq percent confirming:82.2581
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:CATGTGATTGCTCGTGCTGG
Suggested primer 2:CCAATCCCCATCAGCAGGTT