Insertion junction: CLIP2.051257_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.051257
Chromosome:chromosome 3
Location:1818292
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g154250 MAPKKK6 (1 of 1) IPR000719//IPR001245//IPR002290//IPR011009//IPR013320//IPR020635 - Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Concanavalin A-like lectin/glucanase domain // Tyrosine-protein kinase, catalytic domain; Mitogen-Activated Protein Kinase Kinase Kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGTTGCGAAGTACCGTCCGACGCACCGTTTCTCATCGGCCCTAATCCA
Internal bar code:AAATCCCCCCTGCACATTCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3608
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCAAAAGCAATGGCCACA
Suggested primer 2:CGCCCGATAAGTTTCTTGCG