Insertion junction: CLIP2.051277_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.051277
Chromosome:chromosome 12
Location:5715603
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g532250 (1 of 12) IPR000595//IPR018490 - Cyclic nucleotide-binding domain // Cyclic nucleotide-binding-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTCACAATCGTCGCCGCGCCCCCGGCGGAGCCGCCTGTGTTCTGTTGT
Internal bar code:GCCTGGCTGGAATGAAAAATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2871
LEAP-Seq percent confirming:78.9474
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGTTACGTTCTGTCCACG
Suggested primer 2:TCACCCACATGCTCATCCAC