Insertion junction: CLIP2.051283_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.051283
Chromosome:chromosome 3
Location:8619091
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g210401 (1 of 1) PTHR14614//PTHR14614:SF15 - HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAAAGTCATCCCGGAGCAGAAGCATCTGCTGGAAAAGAGGCTTAAGTG
Internal bar code:AATTGAGCGAAAGCATTGATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2259
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GATTGAGCCACGAGGGAACA
Suggested primer 2:ACACACACACACACACACCT