Insertion junction: CLIP2.051283_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.051283
Chromosome:chromosome 3
Location:8619095
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g210401 (1 of 1) PTHR14614//PTHR14614:SF15 - HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTCATGAGGGTGCAGAGAGGGGCCTGCACCTGCCTGCTTGCGTGTGAG
Internal bar code:TTCTTAGAGCATATTTGCACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:5993
LEAP-Seq percent confirming:95.7447
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACACACACACACACCT
Suggested primer 2:GATTGAGCCACGAGGGAACA