Insertion junction: CLIP2.051287_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.051287
Chromosome:chromosome 1
Location:6193350
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g044100 AMYB3,AMB3 Beta-amylase 3; (1 of 3) 3.2.1.2 - Beta-amylase / Saccharogen amylase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTCAGCCAGGTGCGTTACGCCGCACAAGCGGCGCTGCTGGCAAGCTTC
Internal bar code:GATGAAGCAAAAAGGGAACCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1573
LEAP-Seq percent confirming:81.25
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCAACTGTTCAGGCCAAGTG
Suggested primer 2:TCTTGACACATTGGAGCGCT