Insertion junction: CLIP2.051293_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.051293
Chromosome:chromosome 5
Location:1530566
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234662 (1 of 228) IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTACGACGTCATGGTCACCAACCCGCCGTACTCGGGTGCGGCTTGGCCG
Internal bar code:AATGGCGCGGCGCCCGGAAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3140
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GCATTACCGCAAGCGAGAAG
Suggested primer 2:TTGACAGCAGCGGATTGACT