Insertion junction: CLIP2.051297_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.051297
Chromosome:chromosome 10
Location:6257415
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g463350 HRP3 Hydroxyproline-rich glycoprotein; (1 of 1) 2.7.1.107//2.7.11.18//3.2.1.4 - Diacylglycerol kinase (ATP) / Diglyceride kinase // [Myosin light-chain] kinase / Smooth-muscle-myosin-light-chain kinase // Cellulase / Endoglucanase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCTCCCACGCCCACGCCTTCGCCCACCCCTTCGCCCAAGGCCTCGCCC
Internal bar code:TTTTTTTTCGGGCATCAGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:278
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TATCCATGATGAAGCCGCCC
Suggested primer 2:GTGTCGTCCATCCACCAGTT