Insertion junction: CLIP2.051297_6

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.051297
Chromosome:chromosome 13
Location:3762472
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g588750 (1 of 14) PF04577 - Protein of unknown function (DUF563) (DUF563) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATTGTGAGGTGCTTGGAGATGTGCATCCAAGCGAGGCGTGCATGCCGG
Internal bar code:AACACTAGCGGGATTTCCACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:5396
LEAP-Seq percent confirming:97.4359
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTAGCTCGTTGTGCTTGT
Suggested primer 2:TCCTCCCTGCCTGCTTATCT