Insertion junction: CLIP2.051297_7

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.051297
Chromosome:chromosome 13
Location:3762495
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g588750 (1 of 14) PF04577 - Protein of unknown function (DUF563) (DUF563) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTCCCCACGCGCTTGCTTTCCTTGGGGTTGAGCCCCGGAGCACAGCAA
Internal bar code:AACACTAGCGGGATTTCCACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:397
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTCCCTGCCTGCTTATCT
Suggested primer 2:AGCTAGCTCGTTGTGCTTGT