Insertion junction: CLIP2.051300_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.051300
Chromosome:chromosome 17
Location:5954605
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g742200 (1 of 1) PTHR22870:SF220 - RCC1 AND BTB DOMAIN-CONTAINING PROTEIN 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAGTGTGGTCTGTGCTATGAGACTGGCTGTTCCCAAAAGCTATATTAC
Internal bar code:ATACGCAATTACTGGAAATACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1223
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCTACAACGCCAAGGACTGT
Suggested primer 2:TGTCTCCGTTGACCTTGAGC