Insertion junction: CLIP2.051300_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.051300
Chromosome:chromosome 17
Location:5954616
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g742200 (1 of 1) PTHR22870:SF220 - RCC1 AND BTB DOMAIN-CONTAINING PROTEIN 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCACACTCCTGCATCCCCCGCCGTTCTTTTGCCACCGCCACTCCGCCCA
Internal bar code:ATACGCAATTACTGGAAATACA

Confirmation - LEAP-Seq

LEAP-Seq distance:2202
LEAP-Seq percent confirming:73.5294
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCTCCGTTGACCTTGAGC
Suggested primer 2:CCTACAACGCCAAGGACTGT