Insertion junction: CLIP2.051313_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.051313
Chromosome:chromosome 14
Location:1312131
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g616550 CYG50 (1 of 1) IPR000104//IPR001054//IPR006189//IPR029787 - Antifreeze protein, type I // Adenylyl cyclase class-3/4/guanylyl cyclase // CHASE domain // Nucleotide cyclase; Adenylate/guanylate cyclase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCCCTGTCAAGCAACATGGACAACAGGTACAGATACCGAACCGTCAGC
Internal bar code:CATGATGTTTCATGCACCTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:5572
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:126
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:126

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGGAGAGGGAGACACTAC
Suggested primer 2:ATGGGCCCTACATGTTTGGG