Insertion junction: CLIP2.051315_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.051315
Chromosome:chromosome 17
Location:4713444
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g732900 (1 of 1) IPR000104//IPR001126 - Antifreeze protein, type I // UmuC domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACATCGGCATGCAGCACCAGCAGGTCCGACGTGGGCGAAGCACTCGCAG
Internal bar code:AGAGGGATATTCTACGAGGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1256
LEAP-Seq percent confirming:48.9796
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:GGAACAGGTTTCCGCAACAC
Suggested primer 2:GATGATGTCCTGGTGCTGCT